• Balaji, V., J. Anderson, I. Held, M.Winton, J. Durachta, S. Malyshev, and R. Stouffer, “The Exchange Grid: a mechanism for data exchange between Earth System components on independent grids,” submitted to Proc. of International Conference on Parallel Computational Fluid Dynamics, University of Maryland, College Park Campus, May 24 – 27, 2005.
  • Battle, M., S.M. Fletcher, M.L. Bender, R.F. Keeling, A.C. Manning, N. Gruber, P.P. Tans, M.B. Hendricks, D.T. Ho, C. Simons, R. Mika, and B. Paplawsky, “Atmospheric potential oxygen: New observations and their implications for some atmospheric and oceanic models of the global oxygen and carbon dioxide cycles,” Global Biogeochemical Cycles (in press), 2005.
  • Behrenfeld, M., R. O’Malley, D.A. Siegel, C. McClain, J. Sarmiento, G. Feldman, P. Falkowski, E. Boss, and A. Milligan, “Climate-driven trends in contemporary ocean productivity,” submitted to Science.
  • Bender, M.L., D.T. Ho, M.B. Hendricks, R. Mika, M.O. Battle, P.P. Tans, T.J. Conway, B. Sturtevant, and N. Cassar, “Atmospheric O2/N2 changes, 1993–2002: Implications for the partitioning of fossil fuel CO2 sequestration,” Global Biogeochemical Cycles, 19, GB4017, doi:10.1029/2004GB002410, 2005.
  • Bohlman, S.A. and S.T. O’Brien, “The relationship of allometry, adult stature and regeneration requirement of 65 species on Barro Colorado Island, Panama,” Journal of Tropical Ecology, (in press).
  • Bohlman, S.A. and D. Lashlee, “High spatial and spectral resolution remote sensing of Panama Canal Zone forests: An applied example mapping tropical tree species,” The Rio Chagres: A Multidisciplinary Profile of a Tropical Watershed. Harmon, R. S. (ed), Kluwer Press, Dordrecht, 2005.
  • Brunelle, B.G., D.M. Sigman, M.S. Cook, L.D. Keigwin, G.H. Haug, B. Mingram, and G. Schettler, “Evidence from diatom-bound nitrogen isotopes for Subarctic Pacific stratification during the last ice age and a link to North Pacific denitrification changes,” Paleoceanography, in review.
  • de Boer, A.M., D.M. Sigman, and J.R. Toggweiler, “The effect of global ocean temperature change on deep ocean ventilation,” Paleoceanography, in review.
  • Crevoisier, C., M. Gloor, E. Gloaguen, L. W. Horowitz, J. L. Sarmiento, C. Sweeney and P. P. Tans, “A direct carbon budgeting approach to infer carbon sources and sinks. Design and synthetic application to complement NACP observation network,” Submitted to Tellus B, 2006.
  • Delworth, T.L. A.J. Broccoli, A. Rosati, R.J. Stouffer, V. Balaji, J.T. Beesley, W.F. Cooke, K.W. Dixon, J. Dunne, K.A. Dunne, J.W. Durachta, K.L. Findell, P. Ginoux, A. Gnanadesikan, C.T. Gordon, S.M. Griffies, R. Gudgel, M.J. Harrison, I.M. Held, R.S. Hemler, L.W. Horowitz, S.A. Klein, T.R. Knutson, P.J. Kushner, A.L. Langenhorst, H.-C. Lee, S.J. Lin, J. Lu, S.L. Malyshev, P.C. Milly, V. Ramaswamy, J. Russell, M.D. Schwarzkopf, E. Shevliakova, J. Sirutis, M. Spelman, W.F. Stern, M.Winton, A.T. Wittenberg, B. Wyman, F. Zeng, R. Zhang, “GFDL’s CM2 Global Coupled Climate Models. Part 1: Formulation and Simulation Characteristics,” Accepted to J. of Climate, 2005.
  • Dunne, J.P., R.A. Armstrong, A. Gnanadesikan, and J.L. Sarmiento, “Empirical and mechanistic models for the particle export,” Global Biogeochem. Cycles (in press).
  • Dutay, J.C., P. Jean-Baptiste, J.-M. Campin, A. Ishida, E. Maier-Reimer, R.J. Matear, A. Mouchet, I.J. Totterdell, Y. Yamanaka, KI.B. Rodgers, G. Madec, and J.Orr, Evaluation of OCMIP-2 Ocean Models’ Deep Circulation with Mantle Helium-3, Journal of Marine Systems, 48, 15-36, 2004.
  • Fiore A.M., L.W. Horowit, D.W. Purves, H. Levy II, M. Evans, Y. Wang, Q. Li, and R.M. Yantosca, “Evaluating the contribution of changes in isoprene emissions to surface ozone trends over the eastern United States,” Journal of Geophysical Research Vol. 110, D12303, doi:10.1029/2004JD005485, 2005.
  • Fletcher, S.E., N. Gruber, A.R. Jacobson, S.C. Doney, S. Dutkiewicz, M. Follows, K. Lindsay, D. Menemenlis, A. Mouchet, and J. Sarmiento, “Inverse estimates of anthropogenic carbon uptake, transport, and storage by the ocean,” Global Biogeochem. Cycles (in press).
  • Gloor, M., E. Dlugokensky, C. Brenninkmeijer, C. Crevoisier, L. Horowitz, “Evaluation of Mozart model tropospheric transport using SF6 data,” in prep. For submission to J. Geophys. Res.
  • Guo, Z., P.A. Dirmeyer, R.D. Koster, G. Bonan, E. Chan, P. Cox, C.T. Gordon, S. Kanae, E. Kowalczyk, D. Lawrence, P. Liu, C.-H. Lu, S. Malyshev, B. McAvaney, J.L. McGregor, K. Mitchell, D. Mocko, T. Oki, K.W. Oleson, A. Pitman, Y.C. Sud, C.M. Taylor, D. Verseghy, R. Vasic, Y. Xue, and T. Yamada, “GLACE: The Global Land-Atmosphere Coupling Experiment. 2. Analysis,” submitted to J. of Hydrometeorology, 2005.
  • Hastings, M.G., D.M. Sigman, and E.J. Steig, “Glacial/interglacial changes in the isotopes of nitrate from the Greenland Ice Sheet Project 2 (GISP2) ice core,” Global Biogeochemical Cycles, 19, GB4024, doi:10.1029/2005GB002502, 2005.
  • Haug, G.H., A. Ganopolski, D.M. Sigman, A. Rosell-Mele, G.E.A. Swann, R. Tiedemann, S.L. Jaccard, J. Bollmann, M.A. Maslin, M.J. Leng, and G. Eglinton, “North Pacific seasonality and the glaciation of North America 2.7 million years ago,” Nature, 433, 821-825, 2005.
  • Jaccard, S.L., G.H. Haug, D.M. Sigman, T.F. Pedersen, H.R. Thierstein, and U. Rohl, “Glacial/interglacial changes in subarctic North Pacific stratification,” Science, 308, 1003-1006, 2005.
  • Jacobson, A.R., S.E. Mikaloff-Fletcher, N. Gruber, J.L. Sarmiento, M. Gloor, and TransCom Modelers, “A joint atmosphere-ocean inversion for surface fluxes of carbon dioxide: I. Methods and global-scale fluxes,” submitted to Global Biogeochem Cycles.
  • Jacobson, A.R., S.E. Mikaloff-Fletcher, N. Gruber, J.L. Sarmiento, M. Gloor, and TransCom Modelers, “A joint atmosphere-ocean inversion for surface fluxes of carbon dioxide: II. Regional results,” submitted to Global Biogeochem Cycles.
  • Jin, X., N. Gruber, J.P. Dunne, J.L. Sarmiento, and R.A. Armstrong, “Diagnosing CaCO3 and opal export and phytoplankton functional groups from global nutrient and alkalinity distributions,” Global Biogeochem. Cycles (in press).
  • Kaiser, J., M.K. Reuer, B. Barnett, and M.L. Bender, “Marine productivity estimates from continuous oxygen/argon ratio measurements by shipboard membrane inlet mass spectrometry,” Geophysical Research Letters,32, L19605, doi:10.1029/2005GL023459, 2005.
  • Kieft, T.L., S.M. McCuddy, T.C. Onstott, M. Davidson, L.-H. Lin, B. Mislowack, L.M. Pratt, E. Boice, B. Sherwood Lollar, J. Lippmann-Pipke, S.M. Pfiffner, T.J. Phelps, T. Gihring, D. Moser, and A. van Heerden, “Geochemically Generated, Energy-Rich Substrates and Indigenous Microorganisms in Deep, Ancient Groundwater”, Geomicrobiology Journal, 22:325-355, 2005.
  • Klein, S.A., J. Boyle, S. Malyshev, S. Xie, and X. Jiang. “Using ARM observations, short-range forecasts, and single-column model integrations to diagnose the boreal summer warm and dry bias over the U.S. Southern Great Plains in the GFDL climate model,” submitted to J. of Climate, 2005.
  • Koster, R.D., Z. Guo, P.A. Dirmeyer, G.G. Bonan, E. Chan, P. Cox, C.T. Gordon, S. Kanae, E. Kowalczyk, D. Lawrence, P. Liu, C.-H. Lu, S. Malyshev, B. McAvaney, J.L. McGregor, K. Mitchell, D. Mocko, T. Oki, K.W. Oleson, A. Pitman, Y.C. Sud, C.M. Taylor, D. Verseghy, R. Vasic, Y. Xue, and T. Yamada, “GLACE: The Global Land-Atmosphere Coupling Experiment. 1. Overview,” submitted to J. of Hydrometeorology, 2005.
  • Lihung, L.-H., P.-L. Wang, D. Rumble, J. Lippmann-Pipke, E. Boice, L.M. Pratt, B. Sherwood Lollar, Brodie, Eoin, T. Hazen, G. Andersen, T. DeSantis, D.P. Moser, D. Kershaw, and T.C. Onstott, “Long term biosustainability in a high energy, low diversity crustal biotome,” submitted to Science, 2006.
  • Livnat, A., S.W. Pacala, S.A. Levin, “The Evolution of Intergenerational Discounting in Offspring Quality,” Am. Nat. Vol. 165, No. 3, 2005.
  • Marinov, I.A. Gnanadesikan, J.R. Toggweiler, and J.L. Sarmiento, “The Southern Ocean biogeochemical divide,” submitted to Nature.
  • Mignone, B.K., A. Gnanadesikan, J.L. Sarmiento, R.D. Slater, “Central role of southern hemisphere winds and eddies in modulating the oceanic uptake of anthropogenic carbon,” Geophys. Res. Lett. (in press).
  • Muller-Landau, H.C., R.C. Condit, J. Chave, S.C. Thomas, S.A. Bohlman, and 34 Others, “Testing metabolic ecology theory for allometric scaling of tree size, growth, and mortality in tropical forests,” Ecology Letters (in press).
  • Onstott, T.C., D. McGown, J. Kessler, B. Sherwood Lollar, K.K. Lehmann, and S. Clifford, “Martian CH4: sources, flux and detection,” Astrobiology Journal (in press), 2006.
  • Onstott, T.C., L.-H. Lin, M. Davidson, B. Mislowack, M. Borcsik, J. Hall, G. Slater, J. Ward, B. Sherwood Lollar, J. Lippmann-Pipke, E. Boice, L.M. Pratt, S.M. Pfiffner, D.P. Moser, T.M. Gihring, T. Kieft, T.J. Phelps, E. van Heerden, D. Litthaur, M. DeFlaun, R. Rothmel, G. Wanger, and G. Southam, “The origin and age of biogeochemical trends in deep fracture water of the Witwatersrand Basin, South Africa,” Geomicrobiol. Jour. (in press), 2006.
  • Orr, J.C., V.J. Fabry, O. Aumont, L. Bopp, S.C. Doney, R.M. Feely, A. Gnanadesikan, N. Gruber, A. Ishida, F. Joos, R.M. Key, K. Lindsay, E. Maier-Reimer, R. Matear, P. Monfray, A. Mouchet, R.G. Najjar, G.-K.Plattner, K.B. Rodgers, C.L. Sabine, J.L. Sarmiento, R. Schlitzer, R.D. Slater, I.J. Totterdell, M.-F. Weirig, Y. Yamanaka, and A. Yool, “Anthropogenic ocean acidification over the 21st century and its impact on marine calcifying organisms,” Nature, 437, 681-686, 2005.
  • Purves, D.W. and S.W. Pacala, “Ecological drift in niche-structured communities: neutral pattern does not imply neutral process,” Biotic Interactions in the Tropics, D. Burslem, M. Pinard, S. Hartley (eds.), Cambridge University, pp. 107 –138, (in press), 2005.
  • Purves , D.W. and S.W. Pacala. 2005. Ecological drift in niche-structured communities: neutral pattern does not imply neutral process, British Ecological Society, (in press).
  • Purves, D.W. and J. Dushoff, “Directed seed dispersal and metapopulation response to habitat loss and disturbance: application to Eichhornia paniculata,” Journal of Ecology, 93, 658 – 669, 2005.
  • Rodgers, K.B., A. Aumont, G. Madec, C. Menkes, J. Orr, and D. Schrag, Radiocarbon as a thermocline proxy in th eastern equatorial Pacific, Geophys. Res. Lett., 31, L14314, doi:10.1029/2004GL019764, 2004.
  • Rodgers, K.B., P. Friederichs, and M. Latif, Tropical Pacific Decadal Variability and its relation to decadal modulations of ENSO, Journal of Climate, Vol. 17, No. 19, 3761-3774, 2004.
  • Rodgers, K.B., S. Charbit, M. Kageyama, G. Ramstein, C. Ritz, J. Yin, G. Lohmann, S. Lorenz, and M. Khodri, Sensitivity of Northern Hemispheric continental ice sheets to tropical SSTs during deglaciation, Geophys. Res. Lett., 31, L02206, doi:10.1029/2003GL018375, 2004.
  • Robinson, R.S., D.M. Sigman, P.J. DiFiore, M.M. Rohde, T.A. Mashiotta, and D.W. Lea, “Diatom-bound 15N/14N: New support for enhanced nutrient consumption in the ice age Subantarctic,” Paleoceanography, 20, 10.1029/2004PA001114, 2005.
  • Sandin, S.A. and S.W. Pacala, “Demographic theory of coral reef fish populations with stochastic recruitment: comparing sources of population regulation,” American Naturalist, 165: 107-119, 2005.
  • Sandin, S.A., S.W. Pacala, “Fish aggregation results in inversely density dependent predation on continuous coral reefs,” Ecology 86(6), pp. 1520-1530, 2005.
  • Sarmiento, J.L., and N. Gruber, Ocean Biogeochemical Dynamics, Princeton University Press (in press).
  • Shevliakova, E., S.W. Pacala, S. Malyshev, G.C. Hurtt, P.C.D. Milly, J.P. Caspersen, L. Thompson, C. Wirth and K.A. Dunne, “The Land Carbon Cycle and Vegetation Dynamics in the Dynamic Global Land Model LM3V,” submitted to Global Change Biology.
  • Sigman, D. M., J. Granger, P. J. DiFiore, M. M. Lehmann, R. Ho, G. Cane, and A. van Geen (2005), Coupled nitrogen and oxygen isotope measurements of nitrate along the eastern North Pacific margin, Global Biogeochem. Cycles, 19, GB4022, doi:10.1029/2005GB002458.
  • Tiwari, Y. K., M. Gloor, R. J. Engelen, F. Chevallier, C. Rödenbeck, S. Körner, P. B. Braswell, M. Heimann, “Comparing CO2 retrieved from AIRS on the AQUA satellite with model predictions: implications for constraining surface fluxes and lower–to-upper troposphere transport,” Submitted to J. Geophys. Res., in revision.
  • Tohjima, Y., H. Mukai, T. Machida, Y. Nojiri and M. Gloor, “First measurements of the latitudinal atmospheric O2 and CO2 distributions across the Western Pacific,” Geophys. Res. Lett., in press.